GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6MZF designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6MZF_GDP_Y_600 | 45% | 48% | 0.204 | 0.937 | 0.95 | 1.06 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_R_600 | 42% | 48% | 0.218 | 0.94 | 0.93 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_D_600 | 41% | 48% | 0.232 | 0.948 | 0.94 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_P_600 | 35% | 46% | 0.269 | 0.961 | 0.93 | 1.14 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_B_600 | 31% | 47% | 0.278 | 0.95 | 0.93 | 1.1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_I_600 | 31% | 47% | 0.265 | 0.935 | 0.93 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_W_600 | 31% | 47% | 0.269 | 0.939 | 0.96 | 1.09 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZF_GDP_K_600 | 26% | 46% | 0.239 | 0.88 | 0.96 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9GMY_GDP_B_501 | 100% | 50% | 0.034 | 0.992 | 1.05 | 0.89 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9GNU_GDP_B_501 | 100% | 52% | 0.035 | 0.991 | 1.15 | 0.73 | 2 | - | 0 | 0 | 100% | 1 |
| 9F07_GDP_F_501 | 100% | 59% | 0.042 | 0.986 | 0.78 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 5JCB_GDP_B_501 | 100% | 35% | 0.044 | 0.987 | 1.25 | 1.33 | 3 | 3 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
| 9IAY_GDP_A_201 | 100% | 58% | 0.032 | 0.994 | 0.87 | 0.74 | 2 | - | 0 | 0 | 100% | 1 |
