GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 7L3M designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7L3M_GDP_A_704 | 84% | 38% | 0.099 | 0.96 | 0.79 | 1.62 | - | 8 | 0 | 0 | 100% | 1 |
| 3DTB_GDP_A_800 | 98% | 50% | 0.058 | 0.984 | 0.85 | 1.06 | 1 | 2 | 0 | 0 | 100% | 0.8 |
| 4GNP_GDP_A_701 | 94% | 44% | 0.068 | 0.966 | 0.89 | 1.28 | 1 | 4 | 1 | 0 | 100% | 1 |
| 2QF2_GDP_A_702 | 90% | 49% | 0.082 | 0.966 | 0.9 | 1.06 | - | 3 | 0 | 0 | 100% | 0.7 |
| 5FH5_GDP_A_703 | 90% | 45% | 0.088 | 0.972 | 0.9 | 1.22 | 1 | 2 | 0 | 0 | 100% | 1 |
| 9EIY_GDP_A_705 | 89% | 46% | 0.064 | 0.941 | 1 | 1.1 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
