GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 7MNT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7MNT_GDP_A_301 | 44% | 1% | 0.217 | 0.947 | 5.67 | 2.22 | 13 | 7 | 0 | 0 | 100% | 1 |
| 7MNT_GDP_C_301 | 22% | 1% | 0.261 | 0.878 | 5.71 | 2.5 | 14 | 10 | 0 | 0 | 100% | 1 |
| 3GJ0_GDP_A_302 | 99% | 48% | 0.061 | 0.988 | 1 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5CIW_GDP_A_301 | 98% | 40% | 0.06 | 0.983 | 0.85 | 1.48 | - | 3 | 0 | 0 | 100% | 1 |
| 3GJ8_GDP_A_302 | 98% | 48% | 0.067 | 0.987 | 0.94 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5CIQ_GDP_A_301 | 97% | 41% | 0.068 | 0.983 | 1 | 1.29 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5CIT_GDP_A_301 | 95% | 38% | 0.073 | 0.979 | 1.1 | 1.32 | 3 | 5 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
