Ligand validation:8PFH

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 8PFH designated by the Author

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
8PFH_GDP_A_401	60%	53%	0.18	0.967	0.85	0.96	1	2	2	0	100%	1
8PFH_GDP_B_501	55%	52%	0.194	0.965	0.86	0.99	1	2	0	0	100%	1
8PFH_GDP_D_401	52%	55%	0.211	0.971	0.86	0.86	-	1	0	0	100%	1
8PFH_GDP_C_401	45%	58%	0.221	0.955	0.83	0.79	-	1	0	0	100%	1
9GD4_GDP_D_401	96%	55%	0.06	0.969	0.89	0.86	2	1	0	0	100%	1
8FWP_GDP_A_401	82%	45%	0.131	0.987	0.94	1.19	-	3	0	0	100%	1
8SGD_GDP_C_401	61%	43%	0.176	0.967	0.94	1.24	1	4	0	0	100%	1
1TVK_GDP_B_1500	100%	23%	0.012	0.999	2.28	0.95	3	2	8	0	100%	1
9BL0_GDP_A_201	100%	46%	0.016	0.998	0.96	1.11	1	2	1	0	100%	1
8QEG_GDP_A_401	100%	51%	0.031	0.993	1.02	0.87	3	1	0	0	100%	1
8QEH_GDP_A_405	100%	55%	0.03	0.993	0.89	0.85	1	1	0	0	100%	1
9BAJ_GDP_A_203	100%	41%	0.032	0.994	1.22	1.1	2	2	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.