UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 9KSS designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
9KSS_UDP_A_502 | 96% | 74% | 0.061 | 0.968 | 0.39 | 0.63 | - | - | 0 | 0 | 100% | 1 |
9KSR_UDP_A_502 | 99% | 72% | 0.048 | 0.978 | 0.42 | 0.66 | - | 1 | 0 | 0 | 100% | 1 |
9KSX_UDP_A_502 | 96% | 68% | 0.056 | 0.967 | 0.51 | 0.71 | - | - | 1 | 0 | 100% | 1 |
9KSY_UDP_A_502 | 96% | 72% | 0.057 | 0.965 | 0.46 | 0.62 | - | - | 0 | 0 | 100% | 1 |
9KSM_UDP_A_501 | 87% | 73% | 0.075 | 0.948 | 0.41 | 0.63 | - | 1 | 1 | 0 | 100% | 1 |
9KSO_UDP_A_501 | 83% | 70% | 0.076 | 0.935 | 0.43 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
3H4T_UDP_A_604 | 100% | 42% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |