7XQP | pdb_00007xqp

PSI-LHCI-LHCII-Lhcb9 supercomplex of Physcomitrella patens

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.68 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history. 


Literature

Structural insights into a unique PSI-LHCI-LHCII-Lhcb9 supercomplex from moss Physcomitrium patens.

Zhang, S., Tang, K., Yan, Q., Li, X., Shen, L., Wang, W., He, Y.K., Kuang, T., Han, G., Shen, J.R., Zhang, X.

(2023) Nat Plants 9: 832-846

  • DOI: https://doi.org/10.1038/s41477-023-01401-4
  • Primary Citation of Related Structures:  
    7XQP

  • PubMed Abstract: 

    Photosystem I (PSI) possesses a variable supramolecular organization among different photosynthetic organisms to adapt to different light environments. Mosses are evolutionary intermediates that diverged from aquatic green algae and evolved into land plants. The moss Physcomitrium patens (P. patens) has a light-harvesting complex (LHC) superfamily more diverse than those of green algae and higher plants. Here, we solved the structure of a PSI-LHCI-LHCII-Lhcb9 supercomplex from P. patens at 2.68 Å resolution using cryo-electron microscopy. This supercomplex contains one PSI-LHCI, one phosphorylated LHCII trimer, one moss-specific LHC protein, Lhcb9, and one additional LHCI belt with four Lhca subunits. The complete structure of PsaO was observed in the PSI core. One Lhcbm2 in the LHCII trimer interacts with PSI core through its phosphorylated N terminus, and Lhcb9 mediates assembly of the whole supercomplex. The complicated pigment arrangement provided important information for possible energy-transfer pathways from the peripheral antennae to the PSI core.

    • Organizational Affiliation: 
    • Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I P700 chlorophyll a apoprotein A1742Physcomitrium patensMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
UniProt
Find proteins for Q8MFA3 (Physcomitrium patens)
Explore Q8MFA3 
Go to UniProtKB:  Q8MFA3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8MFA3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I P700 chlorophyll a apoprotein A2733Physcomitrium patensMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
UniProt
Find proteins for Q8MFA2 (Physcomitrium patens)
Explore Q8MFA2 
Go to UniProtKB:  Q8MFA2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8MFA2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I iron-sulfur center80Physcomitrium patensMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
UniProt
Find proteins for Q6YXQ2 (Physcomitrium patens)
Explore Q6YXQ2 
Go to UniProtKB:  Q6YXQ2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6YXQ2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Predicted protein PsaD141Physcomitrium patensMutation(s): 0 
UniProt
Find proteins for A0A2K1JKF2 (Physcomitrium patens)
Explore A0A2K1JKF2 
Go to UniProtKB:  A0A2K1JKF2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1JKF2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
PsaE62Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1IKE2 (Physcomitrium patens)
Explore A0A2K1IKE2 
Go to UniProtKB:  A0A2K1IKE2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1IKE2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
PSI-F159Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1J0L9 (Physcomitrium patens)
Explore A0A2K1J0L9 
Go to UniProtKB:  A0A2K1J0L9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1J0L9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
PSI-G98Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1JC42 (Physcomitrium patens)
Explore A0A2K1JC42 
Go to UniProtKB:  A0A2K1JC42
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1JC42
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
PsaH photosystem I reaction center subunit95Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A9SL09 (Physcomitrium patens)
Explore A9SL09 
Go to UniProtKB:  A9SL09
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA9SL09
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit VIII34Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q6YXR3 (Physcomitrium patens)
Explore Q6YXR3 
Go to UniProtKB:  Q6YXR3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6YXR3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit IX41Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q6YXM2 (Physcomitrium patens)
Explore Q6YXM2 
Go to UniProtKB:  Q6YXM2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6YXM2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
PsaK81Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1KU02 (Physcomitrium patens)
Explore A0A2K1KU02 
Go to UniProtKB:  A0A2K1KU02
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1KU02
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
PSI subunit V163Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1IAD0 (Physcomitrium patens)
Explore A0A2K1IAD0 
Go to UniProtKB:  A0A2K1IAD0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1IAD0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit XII32Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q6YXK4 (Physcomitrium patens)
Explore Q6YXK4 
Go to UniProtKB:  Q6YXK4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6YXK4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
PsaON [auth O]89Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1JDE1 (Physcomitrium patens)
Explore A0A2K1JDE1 
Go to UniProtKB:  A0A2K1JDE1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1JDE1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticO [auth 1],
S [auth 5]		192Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1KU97 (Physcomitrium patens)
Explore A0A2K1KU97 
Go to UniProtKB:  A0A2K1KU97
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1KU97
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticP [auth 2],
T [auth 6]		211Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1K0C7 (Physcomitrium patens)
Explore A0A2K1K0C7 
Go to UniProtKB:  A0A2K1K0C7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1K0C7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticQ [auth 3],
U [auth 7]		216Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1KGQ2 (Physcomitrium patens)
Explore A0A2K1KGQ2 
Go to UniProtKB:  A0A2K1KGQ2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1KGQ2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticR [auth 4],
V [auth 8]		205Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A2K1K0E4 (Physcomitrium patens)
Explore A0A2K1K0E4 
Go to UniProtKB:  A0A2K1K0E4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1K0E4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticW [auth 9]225Physcomitrium patensMutation(s): 0 
UniProt
Find proteins for A0A2K1KKR9 (Physcomitrium patens)
Explore A0A2K1KKR9 
Go to UniProtKB:  A0A2K1KKR9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K1KKR9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein, chloroplasticX [auth a],
Y [auth b],
Z [auth c]		227Physcomitrium patensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A9RT62 (Physcomitrium patens)
Explore A9RT62 
Go to UniProtKB:  A9RT62
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA9RT62
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 12 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
DGD
Query on DGD
Download Ideal Coordinates CCD File 
YD [auth B]DIGALACTOSYL DIACYL GLYCEROL (DGDG)
C51 H96 O15
LDQFLSUQYHBXSX-HXXRYREZSA-N
CHL
Query on CHL
Download Ideal Coordinates CCD File 
AM [auth a]
BJ [auth 6]
BM [auth a]
CJ [auth 6]
CM [auth a]
AM [auth a],
BJ [auth 6],
BM [auth a],
CJ [auth 6],
CM [auth a],
DH [auth 3],
DM [auth a],
EG [auth 2],
EI [auth 4],
EL [auth 9],
EM [auth a],
FG [auth 2],
FJ [auth 6],
GJ [auth 6],
HJ [auth 6],
HN [auth c],
IG [auth 2],
IL [auth 9],
JG [auth 2],
JL [auth 9],
KG [auth 2],
KI [auth 5],
KL [auth 9],
LL [auth 9],
LN [auth c],
MF [auth 1],
ML [auth 9],
MN [auth c],
NN [auth c],
OJ [auth 6],
ON [auth c],
PI [auth 5],
PM [auth b],
PN [auth c],
QK [auth 8],
RF [auth 1],
RG [auth 2],
RK [auth 8],
SK [auth 8],
TM [auth b],
UM [auth b],
VH [auth 4],
VM [auth b],
WH [auth 4],
WL [auth a],
WM [auth b],
XH [auth 4],
XM [auth b],
YK [auth 8],
ZJ [auth 7]
CHLOROPHYLL B
C55 H70 Mg N4 O6
MWVCRINOIIOUAU-UYSPMESUSA-M
CLA
Query on CLA
Download Ideal Coordinates CCD File 
AA [auth A]
AB [auth A]
AD [auth B]
AF [auth L]
AG [auth 1]
AA [auth A],
AB [auth A],
AD [auth B],
AF [auth L],
AG [auth 1],
AH [auth 3],
AI [auth 4],
AK [auth 7],
AN [auth b],
BA [auth A],
BB [auth A],
BD [auth B],
BF [auth L],
BH [auth 3],
BI [auth 4],
BK [auth 7],
BN [auth b],
CA [auth A],
CB [auth A],
CD [auth B],
CE [auth F],
CH [auth 3],
CI [auth 4],
CK [auth 7],
CN [auth b],
DA [auth A],
DB [auth A],
DD [auth B],
DI [auth 4],
DJ [auth 6],
DK [auth 7],
DL [auth 8],
EA [auth A],
EB [auth A],
EC [auth B],
ED [auth B],
EE [auth F],
EH [auth 3],
EJ [auth 6],
EK [auth 7],
FA [auth A],
FB [auth A],
FC [auth B],
FD [auth B],
FE [auth F],
FF [auth O],
FH [auth 3],
FK [auth 7],
FL [auth 9],
FM [auth a],
GA [auth A],
GB [auth A],
GC [auth B],
GD [auth B],
GF [auth O],
GG [auth 2],
GH [auth 3],
GK [auth 7],
GL [auth 9],
GM [auth a],
HA [auth A],
HB [auth A],
HC [auth B],
HD [auth B],
HE [auth G],
HF [auth O],
HG [auth 2],
HH [auth 3],
HK [auth 7],
HL [auth 9],
HM [auth a],
IA [auth A],
IB [auth A],
IC [auth B],
ID [auth B],
IE [auth G],
IF [auth O],
IH [auth 3],
IJ [auth 6],
IM [auth a],
IN [auth c],
JA [auth A],
JB [auth A],
JC [auth B],
JD [auth B],
JE [auth G],
JH [auth 3],
JJ [auth 6],
JM [auth a],
JN [auth c],
KA [auth A],
KB [auth A],
KC [auth B],
KD [auth B],
KH [auth 3],
KJ [auth 6],
KN [auth c],
LA [auth A],
LB [auth A],
LC [auth B],
LD [auth B],
LG [auth 2],
LH [auth 3],
LI [auth 5],
LJ [auth 6],
MA [auth A],
MB [auth A],
MC [auth B],
MD [auth B],
ME [auth H],
MG [auth 2],
MI [auth 5],
MJ [auth 6],
MK [auth 8],
NA [auth A],
NB [auth A],
NC [auth B],
ND [auth B],
NF [auth 1],
NG [auth 2],
NI [auth 5],
NJ [auth 6],
NK [auth 8],
NL [auth 9],
OA [auth A],
OB [auth A],
OC [auth B],
OD [auth B],
OF [auth 1],
OG [auth 2],
OI [auth 5],
OK [auth 8],
OL [auth 9],
PA [auth A],
PB [auth A],
PC [auth B],
PD [auth B],
PE [auth J],
PF [auth 1],
PG [auth 2],
PK [auth 8],
PL [auth 9],
QA [auth A],
QC [auth B],
QD [auth B],
QF [auth 1],
QG [auth 2],
QI [auth 5],
QL [auth 9],
QM [auth b],
QN [auth c],
RA [auth A],
RC [auth B],
RD [auth B],
RH [auth 4],
RI [auth 5],
RM [auth b],
RN [auth c],
SA [auth A],
SC [auth B],
SF [auth 1],
SH [auth 4],
SI [auth 5],
SM [auth b],
SN [auth c],
TA [auth A],
TC [auth B],
TE [auth K],
TF [auth 1],
TH [auth 4],
TI [auth 5],
TK [auth 8],
TN [auth c],
UA [auth A],
UC [auth B],
UE [auth K],
UF [auth 1],
UH [auth 4],
UI [auth 5],
UJ [auth 7],
UK [auth 8],
UN [auth c],
VA [auth A],
VC [auth B],
VE [auth K],
VF [auth 1],
VI [auth 5],
VJ [auth 7],
VK [auth 8],
WA [auth A],
WC [auth B],
WE [auth K],
WF [auth 1],
WI [auth 5],
WJ [auth 7],
WK [auth 8],
XA [auth A],
XC [auth B],
XF [auth 1],
XG [auth 3],
XI [auth 5],
XJ [auth 7],
XK [auth 8],
XL [auth a],
YA [auth A],
YC [auth B],
YF [auth 1],
YG [auth 3],
YH [auth 4],
YJ [auth 7],
YL [auth a],
YM [auth b],
ZA [auth A],
ZB [auth A],
ZC [auth B],
ZE [auth L],
ZF [auth 1],
ZG [auth 3],
ZH [auth 4],
ZL [auth a],
ZM [auth b]
CHLOROPHYLL A
C55 H72 Mg N4 O5
ATNHDLDRLWWWCB-AENOIHSZSA-M
LMG
Query on LMG
Download Ideal Coordinates CCD File 
LE [auth G],
PJ [auth 6],
SE [auth J],
SG [auth 2]		1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
C45 H86 O10
DCLTVZLYPPIIID-CVELTQQQSA-N
LHG
Query on LHG
Download Ideal Coordinates CCD File 
AJ [auth 5]
CC [auth A]
CL [auth 8]
DG [auth 1]
GN [auth b]
AJ [auth 5],
CC [auth A],
CL [auth 8],
DG [auth 1],
GN [auth b],
II [auth 4],
JI [auth 4],
LF [auth 1],
MM [auth a],
RB [auth A],
SB [auth A],
TJ [auth 6],
VL [auth 9],
WG [auth 2],
ZN [auth c]
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
C38 H75 O10 P
BIABMEZBCHDPBV-MPQUPPDSSA-N
NEX
Query on NEX
Download Ideal Coordinates CCD File 
FN [auth b],
UL [auth 9],
YN [auth c]		(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL
C40 H56 O4
PGYAYSRVSAJXTE-OQASCVKESA-N
XAT
Query on XAT
Download Ideal Coordinates CCD File 
AL [auth 8]
CG [auth 1]
GI [auth 4]
JK [auth 7]
NH [auth 3]
AL [auth 8],
CG [auth 1],
GI [auth 4],
JK [auth 7],
NH [auth 3],
NM [auth a],
RJ [auth 6],
TL [auth 9],
UG [auth 2],
XN [auth c],
ZI [auth 5]
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
C40 H56 O4
SZCBXWMUOPQSOX-WVJDLNGLSA-N
LUT
Query on LUT
Download Ideal Coordinates CCD File 
BG [auth 1]
DN [auth b]
EN [auth b]
FI [auth 4]
IK [auth 7]
BG [auth 1],
DN [auth b],
EN [auth b],
FI [auth 4],
IK [auth 7],
KM [auth a],
LM [auth a],
MH [auth 3],
QJ [auth 6],
RL [auth 9],
SL [auth 9],
TG [auth 2],
VN [auth c],
WN [auth c],
YI [auth 5],
ZK [auth 8]
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
C40 H56 O2
KBPHJBAIARWVSC-NSIPBSJQSA-N
BCR
Query on BCR
Download Ideal Coordinates CCD File 
BC [auth A]
BE [auth F]
BL [auth 8]
CF [auth L]
DE [auth F]
BC [auth A],
BE [auth F],
BL [auth 8],
CF [auth L],
DE [auth F],
DF [auth L],
EF [auth M],
GE [auth G],
HI [auth 4],
JF [auth O],
KE [auth G],
KK [auth 7],
LK [auth 7],
NE [auth I],
OE [auth J],
OH [auth 3],
PH [auth 3],
QE [auth J],
RE [auth J],
SJ [auth 6],
TB [auth A],
TD [auth B],
UB [auth A],
UD [auth B],
VB [auth A],
VD [auth B],
VG [auth 2],
WB [auth A],
WD [auth B],
XB [auth A],
XD [auth B],
XE [auth K],
YE [auth L]
BETA-CAROTENE
C40 H56
OENHQHLEOONYIE-JLTXGRSLSA-N
LMU (Subject of Investigation/LOI)
Query on LMU
Download Ideal Coordinates CCD File 
AC [auth A],
DC [auth A],
KF [auth O],
OM [auth b],
QH [auth 3]		DODECYL-ALPHA-D-MALTOSIDE
C24 H46 O11
NLEBIOOXCVAHBD-YHBSTRCHSA-N
PQN
Query on PQN
Download Ideal Coordinates CCD File 
QB [auth A],
SD [auth B]		PHYLLOQUINONE
C31 H46 O2
MBWXNTAXLNYFJB-NKFFZRIASA-N
SF4
Query on SF4
Download Ideal Coordinates CCD File 
AE [auth C],
YB [auth A],
ZD [auth C]		IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
TPO
Query on TPO		X [auth a],
Y [auth b],
Z [auth c]		L-PEPTIDE LINKINGC4 H10 N O6 PTHR
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.68 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2020YFA0907600
Chinese Academy of SciencesChinaYSBR-004

Revision History  (Full details and data files)

  • Version 1.0: 2023-04-26
    Type: Initial release
  • Version 1.1: 2023-05-03
    Changes: Database references
  • Version 1.2: 2023-05-10
    Changes: Database references
  • Version 1.3: 2023-06-07
    Changes: Database references
  • Version 1.4: 2024-11-06
    Changes: Data collection, Structure summary