4KYI

Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5


ChainDomainClassArchitectureTopologyHomology
B3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
H3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
A3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
A3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
C3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
C3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
E3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
E3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
G3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain
G3.40.1090.10 Alpha Beta 3-Layer(aba) Sandwich Cytosolic phospholipase A2 catalytic domain Cytosolic phospholipase A2 catalytic domain

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
B, D, F, HPF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain
A, C, E, GPF01734Patatin-like phospholipase (Patatin)Patatin-like phospholipase- Family