Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_S29e4tydA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
BPeptidase_S29e4tydB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
CPeptidase_S29e4tydC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
DPeptidase_S29e4tydD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
EPeptidase_S29e4tydE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
FPeptidase_S29e4tydF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
GPeptidase_S29e4tydG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
HPeptidase_S29e4tydH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
I [auth J]Peptidase_S29e4tydJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
J [auth K]Peptidase_S29e4tydK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
K [auth L]Peptidase_S29e4tydL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)
L [auth M]Peptidase_S29e4tydM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Peptidase_S29ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
A2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
B2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
B2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
C2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
C2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
D2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
D2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
E2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
E2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
F2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
F2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
G2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
G2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
H2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
H2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
I [auth J]2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
I [auth J]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
J [auth K]2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
J [auth K]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
K [auth L]2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
K [auth L]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
L [auth M]2.40.10.120 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
L [auth M]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF02907Hepatitis C virus NS3 protease (Peptidase_S29)Hepatitis C virus NS3 proteaseHepatitis C virus NS3 protein is a serine protease which has a trypsin-like fold. The non-structural (NS) protein NS3 is one of the NS proteins involved in replication of the HCV genome. NS2-3 proteinase, a zinc-dependent enzyme, performs a single p ...Hepatitis C virus NS3 protein is a serine protease which has a trypsin-like fold. The non-structural (NS) protein NS3 is one of the NS proteins involved in replication of the HCV genome. NS2-3 proteinase, a zinc-dependent enzyme, performs a single proteolytic cut to release the N-terminus of NS3. The action of NS3 proteinase (NS3P), which resides in the N-terminal one-third of the NS3 protein, then yields all remaining non-structural proteins. The C-terminal two-thirds of the NS3 protein contain a helicase. The functional relationship between the proteinase and helicase domains is unknown. NS3 has a structural zinc-binding site and requires cofactor NS4A.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
NS3 protease

InterPro: Protein Family Classification InterPro Database Homepage