5IIT
Structure of SPX domain of the yeast inorganic polyphophate polymerase Vtc4 crystallized by carrier-driven crystallization in fusion with the macro domain of human histone macroH2A1.1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Macro domain-like | 8036145 | 3000458 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Macro domain-like | 8036145 | 3000458 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Macro domain-like | 8036145 | 3000458 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Macro domain-like | 8036145 | 3000458 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5iitA2 | A: alpha bundles | X: SPX domain (From Topology) | H: SPX domain (From Topology) | T: SPX domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF01661 | e5iitA1 | A: a/b three-layered sandwiches | X: Macro domain-like (From Topology) | H: Macro domain-like (From Topology) | T: Macro domain-like | F: PF01661 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5iitB2 | A: alpha bundles | X: SPX domain (From Topology) | H: SPX domain (From Topology) | T: SPX domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF01661 | e5iitB1 | A: a/b three-layered sandwiches | X: Macro domain-like (From Topology) | H: Macro domain-like (From Topology) | T: Macro domain-like | F: PF01661 | ECOD (1.6) |
C | F_UNCLASSIFIED | e5iitC2 | A: alpha bundles | X: SPX domain (From Topology) | H: SPX domain (From Topology) | T: SPX domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF01661 | e5iitC1 | A: a/b three-layered sandwiches | X: Macro domain-like (From Topology) | H: Macro domain-like (From Topology) | T: Macro domain-like | F: PF01661 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5iitD2 | A: alpha bundles | X: SPX domain (From Topology) | H: SPX domain (From Topology) | T: SPX domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF01661 | e5iitD1 | A: a/b three-layered sandwiches | X: Macro domain-like (From Topology) | H: Macro domain-like (From Topology) | T: Macro domain-like | F: PF01661 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01661 | Macro domain (Macro) | Macro domain | The Macro or A1pp domain is a module of about 180 amino acids which can bind ADP-ribose (an NAD metabolite) or related ligands. Binding to ADP-ribose could be either covalent or non-covalent [1]: in certain cases it is believed to bind non-covalently ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042267 | VTC domain superfamily | Homologous Superfamily | |
IPR003807 | Domain of unknown function DUF202 | Domain | |
IPR004331 | SPX domain | Domain | |
IPR018966 | VTC domain | Domain | |
IPR035796 | Core histone macro-H2A, macro domain | Domain | |
IPR032454 | Histone H2A, C-terminal domain | Domain | |
IPR007125 | Histone H2A/H2B/H3 | Domain | |
IPR002119 | Histone H2A | Family | |
IPR021171 | Core histone macro-H2A | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR002589 | Macro domain | Domain | |
IPR043472 | Macro domain-like | Homologous Superfamily |