6TNF
Structure of monoubiquitinated FANCD2 in complex with FANCI and DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Ubiquitin-like | 8043829 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14631 | e6tnfA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF14631 | ECOD (1.6) |
B | PF14675,PF14676,PF14677,PF14678,PF14679,PF14680 | e6tnfB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF14675,PF14676,PF14677,PF14678,PF14679,PF14680 | ECOD (1.6) |
C | PF00240 | e6tnfC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14631 | Fanconi anaemia protein FancD2 nuclease (FancD2) | Fanconi anaemia protein FancD2 nuclease | - | Family | |
PF14675 | FANCI solenoid 1 (FANCI_S1) | FANCI solenoid 1 | - | Repeat | |
PF14676 | FANCI solenoid 2 (FANCI_S2) | FANCI solenoid 2 | - | Repeat | |
PF14677 | FANCI solenoid 3 (FANCI_S3) | FANCI solenoid 3 | - | Repeat | |
PF14678 | FANCI solenoid 4 (FANCI_S4) | FANCI solenoid 4 | - | Repeat | |
PF14679 | FANCI helical domain 1 (FANCI_HD1) | FANCI helical domain 1 | - | Repeat | |
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029313 | FANCI solenoid 3 domain | Domain | |
IPR029305 | FANCI solenoid 1 cap | Domain | |
IPR029310 | FANCI helical domain 1 | Domain | |
IPR029315 | FANCI solenoid 2 domain | Domain | |
IPR029314 | FANCI solenoid 4 domain | Domain | |
IPR029312 | FANCI helical domain 2 | Domain | |
IPR026171 | Fanconi anemia group I protein | Family | |
IPR029308 | FANCI solenoid 1 domain | Domain | |
IPR019954 | Ubiquitin conserved site | Conserved Site | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR019956 | Ubiquitin domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |