5QR8

PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z57258487


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
5-aminolevulinate synthase, erythroid-specific, mitochondrial
B, A
469Homo sapiensMutation(s): 0 
Gene Names: ALAS2 (ALASE, ASB)
EC: 2.3.1.37
Find proteins for P22557 (Homo sapiens)
Go to Gene View: ALAS2
Go to UniProtKB:  P22557
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NVD
Query on NVD

Download SDF File 
Download CCD File 
B
N-{[4-(dimethylamino)phenyl]methyl}-4H-1,2,4-triazol-4-amine
C11 H15 N5
ZPORTAACPUBAHX-UHFFFAOYSA-N
 Ligand Interaction
PLP
Query on PLP

Download SDF File 
Download CCD File 
A, B
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.209 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 125.330α = 90.00
b = 108.280β = 109.11
c = 75.640γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
Aimlessdata scaling
REFMACphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-08-07
    Type: Initial release