Biological Assembly 1  

 3D View: Structure | Electron Density

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Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: authors reported there is no experimental evidence

Macromolecule Content

• Total Structure Weight: 20497.27 
• Atom Count: 1327 
• Residue Count: 176 
• Unique protein chains: 2

5ZUJ

Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA

• DOI: 10.2210/pdb5ZUJ/pdb

• Classification: PROTEIN BINDING
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): 2 


• Deposited: 2018-05-07 Released: 2018-12-05 
• Deposition Author(s): Huang, W.C., Maestre-Reyna, M., Hsiao, T.C., Tsai, M.D.
• Funding Organization(s): null 

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.6 Å
• R-Value Free: 0.242 
• R-Value Work: 0.193 

Literature

Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA.

Huang, W.C., Liao, J.H., Hsiao, T.C., Wei, T.W., Maestre-Reyna, M., Bessho, Y., Tsai, M.D.

(2019) Chembiochem 20: 140-146

• PubMed: 30378729 
• Primary Citation of Related Structures:  
  6A33

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
TNF receptor-associated factor 6	A	161	Homo sapiens	Mutation(s): 0  Gene Names: TRAF6 (RNF85) EC: 2.3.2.27
Find proteins for Q9Y4K3 (Homo sapiens) Go to Gene View: TRAF6 Go to UniProtKB:  Q9Y4K3

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details
peptide 170-184 from TRAF-interacting protein with FHA domain-containing protein A	I	15	Homo sapiens	Mutation(s): 2  Gene Names: TIFA (T2BP)
Find proteins for Q96CG3 (Homo sapiens) Go to Gene View: TIFA Go to UniProtKB:  Q96CG3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.6 Å
• R-Value Free: 0.242 
• R-Value Work: 0.193 
• Space Group: P 6₁ 2 2

Unit Cell:

Length (Å)	Angle (°)
a = 51.518	α = 90.00
b = 51.518	β = 90.00
c = 335.679	γ = 120.00

Software Package:

Software Name	Purpose
Blu-Ice	data collection
PHENIX	model building
XDS	data reduction
PHENIX	refinement
XSCALE	data scaling

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2018-05-07 
• Released Date: 2018-12-05 
• Deposition Author(s): Huang, W.C., Maestre-Reyna, M., Hsiao, T.C., Tsai, M.D.

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Funding Organization	Location	Grant Number
	Taiwan	MOST105-0210-01-12-01
	Taiwan	MOST106-0210-01-15-04
	Taiwan	MOST107-0210-01-19-02

Revision History 

• Version 1.0: 2018-12-05
  Type: Initial release
• Version 1.1: 2019-02-06
  Type: Data collection, Database references