6CI6

Crystal structure of equine serum albumin in complex with nabumetone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.186 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of equine serum albumin in complex with nabumetone

Venkataramany, B.S.Czub, M.P.Shabalin, I.G.Handing, K.B.Steen, E.H.Cooper, D.R.Joachimiak, A.Satchell, K.J.F.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Serum albumin
A
583Equus caballusMutation(s): 0 
Gene Names: ALB
Find proteins for P35747 (Equus caballus)
Go to UniProtKB:  P35747
Protein Feature View
  • Reference Sequence
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NBO
Query on NBO

Download CCD File 
A
nabumetone
C15 H16 O2
BLXXJMDCKKHMKV-UHFFFAOYSA-N
 Ligand Interaction
KNA
Query on KNA

Download CCD File 
A
nonanoic acid
C9 H18 O2
FBUKVWPVBMHYJY-UHFFFAOYSA-N
 Ligand Interaction
TRS
Query on TRS

Download CCD File 
A
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
 Ligand Interaction
SO4
Query on SO4

Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
UNX
Query on UNX

Download CCD File 
A
UNKNOWN ATOM OR ION
X
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.186 
  • Space Group: P 61
  • Diffraction Data DOI: 10.18430/M36CI6 Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 93.879α = 90
b = 93.879β = 90
c = 140.787γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
HKL-3000data reduction
MOLREPphasing
HKL-3000phasing
PDB_EXTRACTdata extraction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States--

Revision History 

  • Version 1.0: 2018-03-07
    Type: Initial release
  • Version 1.1: 2019-12-18
    Changes: Author supporting evidence
  • Version 1.2: 2020-05-13
    Changes: Database references, Structure summary