6KBD

fused To-MtbCsm1 with 2dATP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.237 

wwPDB Validation 3D Report Full Report



Literature

fused To-MtbCsm1 with 2dATP

Zhang, S.Li, T.Huo, Y.Yang, J.Fleming, J.Wei, W.Gu, S.Bi, L.Jiang, T.Zhang, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A),CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)
A
784Thermococcus onnurineus NA1Mycobacterium tuberculosis H37Rv
This entity is chimeric
Mutation(s): 0 
Gene Names: csm1cas10TON_0893
EC: 3.1 (PDB Primary Data), 2.7.7 (PDB Primary Data)
Find proteins for P71629 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Go to UniProtKB:  P71629
Find proteins for B6YWB8 (Thermococcus onnurineus (strain NA1))
Go to UniProtKB:  B6YWB8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DTP
Query on DTP

Download CCD File 
A
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
C10 H16 N5 O12 P3
SUYVUBYJARFZHO-RRKCRQDMSA-N
 Ligand Interaction
MG
Query on MG

Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.237 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 57.801α = 90
b = 53.317β = 97.78
c = 124.134γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Chinese Academy of SciencesChina--

Revision History 

  • Version 1.0: 2020-06-24
    Type: Initial release