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Download EndnoteCrystal structure of a Hydrolase, haloacid dehalogenase-like family from Brucella suis 1330
Abendroth, J., Dranow, D.M., Sankaran, B., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
6NQ4
Crystal structure of a Hydrolase, haloacid dehalogenase-like family from Brucella suis 1330
- DOI: 10.2210/pdb6NQ4/pdb
- Classification: HYDROLASE
- Organism(s): Brucella suis 1330
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): No
- Deposited: 2019-01-19 Released: 2019-11-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.183
- R-Value Work: 0.141
- R-Value Observed: 0.142
wwPDB Validation 3D Report Full Report
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| HAD superfamily hydrolase | A, B | 304 | Brucella suis 1330 | Mutation(s): 0 Gene Names: BS1330_II0196 |
Find proteins for A0A0H3GA96 (Brucella suis biovar 1 (strain 1330)) Go to UniProtKB: A0A0H3GA96 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A, B | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| EDO Query on EDO | A, B | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| NA Query on NA | A, B | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.183
- R-Value Work: 0.141
- R-Value Observed: 0.142
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 122.43 | α = 90 |
| b = 60.12 | β = 104.28 |
| c = 86.84 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| XSCALE | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| Arcimboldo | phasing |
| ARP/wARP | model building |
| Coot | model building |
Entry History
Deposition Data
- Deposited Date: 2019-01-19
- Released Date: 2019-11-27 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
