9CPB | pdb_00009cpb

Atomic model of bovine Fallopian tube cilia doublet microtubule (48-nm periodicity)

  • Classification: STRUCTURAL PROTEIN
  • Organism(s): Bos taurus
  • Mutation(s): No 

  • Deposited: 2024-07-18 Released: 2024-10-30 
  • Deposition Author(s): Sun, C., Zeng, J., Zhang, R.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.52 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structural diversity of axonemes across mammalian motile cilia.

Leung, M.R.Sun, C.Zeng, J.Anderson, J.R.Niu, Q.Huang, W.Noteborn, W.E.M.Brown, A.Zeev-Ben-Mordehai, T.Zhang, R.

(2025) Nature 637: 1170-1177

  • DOI: https://doi.org/10.1038/s41586-024-08337-5
  • Primary Citation of Related Structures:  
    9CPB, 9CPC, 9FQR

  • PubMed Abstract: 

    Reproduction, development and homeostasis depend on motile cilia, whose rhythmic beating is powered by a microtubule-based molecular machine called the axoneme. Although an atomic model of the axoneme is available for the alga Chlamydomonas reinhardtii 1 , structures of mammalian axonemes are incomplete 1-5 . Furthermore, we do not fully understand how molecular structures of axonemes vary across motile-ciliated cell types in the body. Here we use cryoelectron microscopy, cryoelectron tomography and proteomics to resolve the 96-nm modular repeat of axonemal doublet microtubules (DMTs) from both sperm flagella and epithelial cilia of the oviduct, brain ventricles and respiratory tract. We find that sperm DMTs are the most specialized, with epithelial cilia having only minor differences across tissues. We build a model of the mammalian sperm DMT, defining the positions and interactions of 181 proteins including 34 newly identified proteins. We elucidate the composition of radial spoke 3 and uncover binding sites of kinases associated with regeneration of ATP and regulation of ciliary motility. We discover a sperm-specific, axoneme-tethered T-complex protein ring complex (TRiC) chaperone that may contribute to construction or maintenance of the long flagella of mammalian sperm. We resolve axonemal dyneins in their prestroke states, illuminating conformational changes that occur during ciliary movement. Our results illustrate how elements of chemical and mechanical regulation are embedded within the axoneme, providing valuable resources for understanding the aetiology of ciliopathy and infertility, and exemplifying the discovery power of modern structural biology.


  • Organizational Affiliation
    • Structural Biochemistry Group, Bijvoet Centre for Biomolecular Research, Utrecht University, Utrecht, the Netherlands.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Armadillo repeat containing 4A [auth 1A]1,044Bos taurusMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil domain containing 114B [auth 1D],
C [auth 1E],
D [auth 1F]
687Bos taurusMutation(s): 0 
UniProt
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil domain containing 173E [auth 1H],
F [auth 1I]
547Bos taurusMutation(s): 0 
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized protein C1orf158 homologG [auth 1K],
H [auth 1L]
196Bos taurusMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Protein FlattopI [auth 1N],
J [auth 1O],
K [auth 1P]
196Bos taurusMutation(s): 0 
UniProt
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP141L [auth 1R]101Bos taurusMutation(s): 0 
UniProt
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia and flagella associated protein 161M [auth 1T],
N [auth 1U]
321Bos taurusMutation(s): 0 
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 20193Bos taurusMutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
EF-hand domain family member BU [auth 2D],
V [auth 2E]
877Bos taurusMutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP276W [auth 2F],
X [auth 2G],
Y [auth 2H]
170Bos taurusMutation(s): 0 
UniProt
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia and flagella associated protein 45AA [auth 2K],
BA [auth 2L],
CA [auth 2M],
Z [auth 2J]
549Bos taurusMutation(s): 0 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia and flagella associated protein 52DA [auth 2O],
EA [auth 2P],
FA [auth 2Q]
623Bos taurusMutation(s): 0 
UniProt
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Methyl-CpG binding domain protein 1GA [auth 2S],
HA [auth 2T]
514Bos taurusMutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia and flagella associated protein 77IA [auth 2V],
JA [auth 2W],
KA [auth 2X],
LA [auth 2Y]
284Bos taurusMutation(s): 0 
UniProt
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP95MA [auth 3A]232Bos taurusMutation(s): 0 
UniProt
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia-and flagella-associated protein 96NA [auth 3C],
OA [auth 3D]
309Bos taurusMutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
EF-hand calcium-binding domain-containing protein 1PA [auth 3F]212Bos taurusMutation(s): 0 
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
EF-hand calcium binding domain 6QA [auth 3H]1,410Bos taurusMutation(s): 0 
UniProt
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
EF-hand domain containing 1RA [auth 3J],
SA [auth 3K],
TA [auth 3L]
640Bos taurusMutation(s): 0 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
EFHC2UA [auth 3N],
VA [auth 3O],
WA [auth 3P],
XA [auth 3Q]
733Bos taurusMutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
Enkurin, TRPC channel interacting proteinAB [auth 3U],
BB [auth 3V],
YA [auth 3S],
ZA [auth 3T]
259Bos taurusMutation(s): 0 
UniProt
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
Protein FAM166B274Bos taurusMutation(s): 0 
UniProt
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 144IB [auth 4D]135Bos taurusMutation(s): 0 
UniProt
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
Meiosis-specific nuclear structural protein 1JB [auth 4F],
KB [auth 4G]
495Bos taurusMutation(s): 0 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
Nucleoside diphosphate kinase 7LB [auth 4I],
MB [auth 4J]
377Bos taurusMutation(s): 0 
EC: 2.7.4.6 (PDB Primary Data), 3.1 (UniProt), 2.7 (UniProt)
UniProt
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Outer dynein arm-docking complex subunit 3NB [auth 4K],
OB [auth 4L],
PB [auth 4M]
621Bos taurusMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
PACRG protein257Bos taurusMutation(s): 0 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Pierce1WB [auth 4V],
XB [auth 4W]
136Bos taurusMutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Pierce2YB [auth 4Y]120Bos taurusMutation(s): 0 
UniProt
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
RIB43A-like with coiled-coils protein 2AC [auth 5B],
ZB [auth 5A]
377Bos taurusMutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Sperm acrosome associated 9169Bos taurusMutation(s): 0 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Tektin-1IC [auth 5L],
JC [auth 5M],
KC [auth 5N],
LC [auth 5O]
418Bos taurusMutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Tektin-2430Bos taurusMutation(s): 0 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
Tektin-3490Bos taurusMutation(s): 0 
UniProt
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
Tektin-4447Bos taurusMutation(s): 0 
UniProt
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
TTC25 proteinQD [auth 6Y],
RD [auth 6Z]
683Bos taurusMutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
Ciliary microtubule associated protein 1ASD [auth 7C],
TD [auth 7D],
UD [auth 7E],
VD [auth 7F]
254Bos taurusMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Ciliary microtubule associated protein 1CWD [auth 7H],
XD [auth 7I]
274Bos taurusMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia and flagella associated protein 90YD [auth 7K],
ZD [auth 7L]
147Bos taurusMutation(s): 0 
UniProt
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
Sperm associated antigen 8AE [auth 7N]484Bos taurusMutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Tubulin beta-4B chain
AG [auth EH],
AH [auth GL],
AJ [auth LF],
AK [auth NF],
AL [auth PH],
AM [auth RL],
AN [auth UF],
AO [auth WJ],
BE [auth AB],
BF [auth CF],
BI [auth JD],
CG [auth EJ],
CH [auth HB],
CJ [auth LH],
CK [auth NH],
CL [auth PJ],
CM [auth SD],
CN [auth UH],
CO [auth WL],
DE [auth AD],
DF [auth CH],
DI [auth JF],
EG [auth EL],
EH [auth HD],
EJ [auth LJ],
EK [auth NJ],
EL [auth PL],
EM [auth SF],
EN [auth UJ],
EO [auth WN],
FE [auth AF],
FF [auth CJ],
FI [auth JH],
FL [auth QB],
GH [auth HF],
GJ [auth LL],
GK [auth NL],
GM [auth SH],
GN [auth UL],
HE [auth AH],
HF [auth CL],
HG [auth FD],
HI [auth JJ],
HL [auth QD],
IH [auth HH],
IJ [auth LN],
IK [auth OB],
IM [auth SJ],
JE [auth AJ],
JF [auth DB],
JG [auth FF],
JI [auth JL],
JL [auth QF],
JN [auth VD],
KH [auth HJ],
KJ [auth MD],
KK [auth OD],
KM [auth SL],
LE [auth AL],
LF [auth DD],
LG [auth FH],
LL [auth QH],
LN [auth VF],
ME [auth BB],
MH [auth HL],
MI [auth KD],
MJ [auth MF],
MK [auth OF],
NF [auth DF],
NG [auth FJ],
NL [auth QJ],
NM [auth TD],
NN [auth VH],
OE [auth BD],
OI [auth KF],
OJ [auth MH],
OK [auth OH],
PF [auth DH],
PG [auth FL],
PH [auth ID],
PL [auth QL],
PM [auth TF],
PN [auth VJ],
QE [auth BF],
QI [auth KH],
QJ [auth MJ],
QK [auth OJ],
QL [auth RB],
RF [auth DJ],
RH [auth IF],
RM [auth TH],
RN [auth VL],
SE [auth BH],
SG [auth GD],
SI [auth KJ],
SJ [auth ML],
SK [auth OL],
SL [auth RD],
TF [auth DL],
TH [auth IH],
TM [auth TJ],
UE [auth BJ],
UG [auth GF],
UI [auth KL],
UJ [auth MN],
UK [auth PB],
UL [auth RF],
UN [auth WD],
VH [auth IJ],
VM [auth TL],
WE [auth BL],
WF [auth ED],
WG [auth GH],
WI [auth KN],
WJ [auth NB],
WK [auth PD],
WL [auth RH],
WN [auth WF],
XE [auth CB],
XH [auth IL],
YF [auth EF],
YG [auth GJ],
YI [auth LD],
YJ [auth ND],
YK [auth PF],
YL [auth RJ],
YM [auth UD],
YN [auth WH],
ZE [auth CD],
ZH [auth IN]
445Bos taurusMutation(s): 0 
UniProt
Find proteins for Q3MHM5 (Bos taurus)
Explore Q3MHM5 
Go to UniProtKB:  Q3MHM5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ3MHM5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
Tubulin alpha-1D chain
AF [auth CE],
AI [auth JC],
BG [auth EI],
BH [auth GM],
BJ [auth LG],
BK [auth NG],
BL [auth PI],
BM [auth SC],
BN [auth UG],
BO [auth WK],
CE [auth AC],
CF [auth CG],
CI [auth JE],
DG [auth EK],
DH [auth HC],
DJ [auth LI],
DK [auth NI],
DL [auth PK],
DM [auth SE],
DN [auth UI],
DO [auth WM],
EE [auth AE],
EF [auth CI],
EI [auth JG],
FG [auth EM],
FH [auth HE],
FJ [auth LK],
FK [auth NK],
FM [auth SG],
FN [auth UK],
GE [auth AG],
GF [auth CK],
GG [auth FC],
GI [auth JI],
GL [auth QC],
HH [auth HG],
HJ [auth LM],
HK [auth OA],
HM [auth SI],
HN [auth UM],
IE [auth AI],
IF [auth CM],
IG [auth FE],
II [auth JK],
IL [auth QE],
IN [auth VC],
JH [auth HI],
JJ [auth MC],
JK [auth OC],
JM [auth SK],
KE [auth AK],
KF [auth DC],
KG [auth FG],
KI [auth JM],
KL [auth QG],
KN [auth VE],
LH [auth HK],
LI [auth KC],
LJ [auth ME],
LK [auth OE],
LM [auth SM],
MF [auth DE],
MG [auth FI],
ML [auth QI],
MM [auth TC],
MN [auth VG],
NE [auth BC],
NH [auth HM],
NI [auth KE],
NJ [auth MG],
NK [auth OG],
OF [auth DG],
OG [auth FK],
OH [auth IC],
OL [auth QK],
OM [auth TE],
ON [auth VI],
PE [auth BE],
PI [auth KG],
PJ [auth MI],
PK [auth OI],
QF [auth DI],
QG [auth FM],
QH [auth IE],
QM [auth TG],
QN [auth VK],
RE [auth BG],
RG [auth GC],
RI [auth KI],
RJ [auth MK],
RK [auth OK],
RL [auth RC],
SF [auth DK],
SH [auth IG],
SM [auth TI],
SN [auth VM],
TE [auth BI],
TG [auth GE],
TI [auth KK],
TJ [auth MM],
TK [auth PA],
TL [auth RE],
TN [auth WC],
UF [auth DM],
UH [auth II],
UM [auth TK],
VE [auth BK],
VF [auth EC],
VG [auth GG],
VI [auth KM],
VJ [auth NA],
VK [auth PC],
VL [auth RG],
VN [auth WE],
WH [auth IK],
WM [auth TM],
XF [auth EE],
XG [auth GI],
XI [auth LC],
XJ [auth NC],
XK [auth PE],
XL [auth RI],
XM [auth UC],
XN [auth WG],
YE [auth CC],
YH [auth IM],
ZF [auth EG],
ZG [auth GK],
ZI [auth LE],
ZJ [auth NE],
ZK [auth PG],
ZL [auth RK],
ZM [auth UE],
ZN [auth WI]
452Bos taurusMutation(s): 0 
EC: 3.6.5
UniProt
Find proteins for Q2HJ86 (Bos taurus)
Explore Q2HJ86 
Go to UniProtKB:  Q2HJ86
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ2HJ86
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP (Subject of Investigation/LOI)
Query on GTP

Download Ideal Coordinates CCD File 
ABA [auth UM]
AQ [auth CM]
AR [auth EM]
BR [auth FC]
BS [auth GI]
ABA [auth UM],
AQ [auth CM],
AR [auth EM],
BR [auth FC],
BS [auth GI],
BT [auth IC],
BU [auth JI],
BV [auth LC],
BY [auth PG],
BZ [auth RI],
CAA [auth TG],
CBA [auth VC],
CCA [auth WI],
CP [auth BG],
CW [auth MI],
CX [auth OA],
DQ [auth DC],
DZ [auth RK],
EAA [auth TI],
ES [auth GK],
ET [auth IE],
EU [auth JK],
EW [auth MK],
EY [auth PI],
FBA [auth VE],
FCA [auth WK],
FP [auth BI],
FQ [auth DE],
FR [auth FE],
FV [auth LE],
FX [auth OC],
FZ [auth SC],
HAA [auth TK],
HO [auth AC],
HQ [auth DG],
HR [auth FF],
HS [auth GM],
HT [auth IG],
HU [auth JM],
HV [auth LF],
HW [auth MM],
HY [auth PK],
IBA [auth VG],
ICA [auth WM],
IP [auth BK],
IX [auth OE],
JO [auth AE],
JQ [auth DI],
JU [auth KC],
JZ [auth SE],
KR [auth FI],
KS [auth HC],
KT [auth II],
KV [auth LI],
KW [auth NA],
KY [auth QC],
LAA [auth TM],
LBA [auth VI],
LQ [auth DK],
LX [auth OG],
MAA [auth UC],
MO [auth AF],
MP [auth CC],
MT [auth IK],
MU [auth KE],
MY [auth QE],
MZ [auth SG],
NQ [auth DM],
NR [auth FK],
NS [auth HE],
NV [auth LK],
NX [auth OI],
OAA [auth UE],
OW [auth NC],
OY [auth QG],
PBA [auth VK],
PO [auth AI],
PP [auth CE],
PQ [auth EC],
PU [auth KG],
PZ [auth SI],
QS [auth HG],
QT [auth IM],
QV [auth LM],
QW [auth NE],
QX [auth OK],
QY [auth QI],
RAA [auth UG],
RBA [auth VM],
RQ [auth EE],
RR [auth FM],
SO [auth AK],
SP [auth CG],
SR [auth GC],
ST [auth JC],
SU [auth KI],
SY [auth QK],
SZ [auth SK],
TBA [auth WC],
TQ [auth EG],
TS [auth HI],
TV [auth MC],
TW [auth NG],
TX [auth PA],
UAA [auth UI],
UP [auth CI],
UZ [auth SM],
VQ [auth EI],
VR [auth GE],
VT [auth JE],
VU [auth KK],
VX [auth PC],
VY [auth RC],
VZ [auth TC],
WO [auth BC],
WS [auth HK],
WV [auth ME],
WW [auth NI],
XAA [auth UK],
XBA [auth WE],
XP [auth CK],
XQ [auth EK],
XY [auth RE],
YR [auth GF],
YT [auth JG],
YU [auth KM],
YX [auth PE],
ZBA [auth WG],
ZO [auth BE],
ZS [auth HM],
ZV [auth MG],
ZW [auth NK],
ZY [auth RG],
ZZ [auth TE]
GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
GDP (Subject of Investigation/LOI)
Query on GDP

Download Ideal Coordinates CCD File 
AAA [auth TF]
AS [auth GH]
AU [auth JH]
AV [auth KN]
AW [auth MH]
AAA [auth TF],
AS [auth GH],
AU [auth JH],
AV [auth KN],
AW [auth MH],
AY [auth PF],
AZ [auth RH],
BCA [auth WH],
BP [auth BF],
BX [auth NL],
CQ [auth DB],
CZ [auth RJ],
DAA [auth TH],
DR [auth FD],
DS [auth GJ],
DT [auth ID],
DU [auth JJ],
DV [auth LD],
DW [auth MJ],
DY [auth PH],
EBA [auth VD],
ECA [auth WJ],
EP [auth BH],
EQ [auth DD],
EX [auth OB],
EZ [auth RL],
FO [auth AB],
GAA [auth TJ],
GQ [auth DF],
GR [auth FF],
GS [auth GL],
GT [auth IF],
GU [auth JL],
GV [auth LF],
GW [auth ML],
GY [auth PJ],
HBA [auth VF],
HCA [auth WL],
HP [auth BJ],
HX [auth OD],
HZ [auth SD],
IO [auth AD],
IQ [auth DH],
IY [auth PL],
JAA [auth TL],
JR [auth FH],
JS [auth HB],
JT [auth IH],
JV [auth LH],
JW [auth MN],
JY [auth QB],
KBA [auth VH],
KCA [auth WN],
KP [auth BL],
KQ [auth DJ],
KX [auth OF],
KZ [auth SF],
LO [auth AF],
LP [auth CB],
LT [auth IJ],
LU [auth KD],
LY [auth QD],
MQ [auth DL],
MR [auth FJ],
MS [auth HD],
MV [auth LJ],
MW [auth NB],
MX [auth OH],
NAA [auth UD],
NBA [auth VJ],
NY [auth QF],
NZ [auth SH],
OO [auth AH],
OP [auth CD],
OT [auth IL],
OU [auth KF],
PR [auth FL],
PS [auth HF],
PV [auth LL],
PW [auth ND],
PX [auth OJ],
PY [auth QH],
QAA [auth UF],
QBA [auth VL],
QQ [auth ED],
QZ [auth SJ],
RO [auth AJ],
RP [auth CF],
RT [auth IN],
RU [auth KG],
RY [auth QJ],
SQ [auth EF],
SS [auth HH],
SV [auth LN],
SW [auth NF],
SX [auth OL],
TAA [auth UH],
TP [auth CH],
TY [auth QL],
TZ [auth SL],
UO [auth AL],
UQ [auth EH],
UR [auth GD],
UT [auth JD],
UU [auth KJ],
UX [auth PB],
UY [auth RB],
VBA [auth WD],
VO [auth BB],
VS [auth HJ],
VV [auth MD],
VW [auth NH],
WAA [auth UJ],
WP [auth CJ],
WQ [auth EJ],
WY [auth RD],
XR [auth GF],
XT [auth JF],
XU [auth KL],
XX [auth PD],
XZ [auth TD],
YBA [auth WF],
YO [auth BD],
YS [auth HL],
YV [auth MF],
YW [auth NJ],
YY [auth RF],
ZAA [auth UL],
ZP [auth CL],
ZQ [auth EL]
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
MG (Subject of Investigation/LOI)
Query on MG

Download Ideal Coordinates CCD File 
ACA [auth WG]
AP [auth BE]
AT [auth HM]
AX [auth NK]
BAA [auth TF]
ACA [auth WG],
AP [auth BE],
AT [auth HM],
AX [auth NK],
BAA [auth TF],
BBA [auth UM],
BQ [auth CM],
BW [auth MH],
CR [auth FC],
CS [auth GI],
CT [auth IC],
CU [auth JI],
CV [auth LC],
CY [auth PG],
DBA [auth VC],
DCA [auth WI],
DP [auth BG],
DX [auth OA],
ER [auth FD],
EV [auth LD],
FAA [auth TI],
FS [auth GK],
FT [auth IE],
FU [auth JK],
FW [auth MK],
FY [auth PI],
GBA [auth VE],
GCA [auth WK],
GO [auth AB],
GP [auth BI],
GX [auth OC],
GZ [auth SC],
IAA [auth TK],
IR [auth FG],
IS [auth GM],
IT [auth IG],
IU [auth JM],
IV [auth LG],
IW [auth MM],
IZ [auth SD],
JBA [auth VG],
JCA [auth WM],
JP [auth BK],
JX [auth OE],
KAA [auth TL],
KO [auth AE],
KU [auth KC],
LR [auth FI],
LS [auth HC],
LV [auth LI],
LW [auth NA],
LZ [auth SF],
MBA [auth VI],
NO [auth AG],
NP [auth CC],
NT [auth IK],
NU [auth KE],
NW [auth NB],
OBA [auth VJ],
OQ [auth DM],
OR [auth FK],
OS [auth HE],
OV [auth LK],
OX [auth OI],
OZ [auth SH],
PAA [auth UE],
PT [auth IL],
QO [auth AI],
QP [auth CE],
QR [auth FL],
QU [auth KG],
RS [auth HG],
RV [auth LM],
RW [auth NE],
RX [auth OK],
RZ [auth SJ],
SAA [auth UG],
SBA [auth VM],
TO [auth AK],
TR [auth GC],
TT [auth JC],
TU [auth KI],
UBA [auth WC],
US [auth HI],
UV [auth MC],
UW [auth NG],
VAA [auth UI],
VP [auth CI],
WBA [auth WD],
WR [auth GE],
WT [auth JE],
WU [auth KK],
WX [auth PC],
WZ [auth TC],
XO [auth BC],
XS [auth HK],
XV [auth ME],
XW [auth NI],
YAA [auth UK],
YP [auth CK],
YQ [auth EK],
YZ [auth TD],
ZR [auth GG],
ZT [auth JG],
ZU [auth KM],
ZX [auth PE]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.52 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States1R01 GM138854

Revision History  (Full details and data files)

  • Version 1.0: 2024-10-30
    Type: Initial release
  • Version 1.1: 2025-01-08
    Changes: Data collection, Database references
  • Version 1.2: 2025-02-12
    Changes: Data collection, Database references
  • Version 1.3: 2025-03-19
    Changes: Data collection, Structure summary