Ligand validation:4YUU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4YUU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YUU_CLA_A1_403	91%	28%	0.062	0.949	1.57	1.32	9	8	0	1	100%	1
4YUU_CLA_a1_403	88%	29%	0.065	0.94	1.57	1.3	8	8	0	1	100%	1
4YUU_CLA_d2_402	88%	27%	0.064	0.937	1.51	1.43	5	9	0	1	100%	1
4YUU_CLA_b1_608	87%	28%	0.073	0.946	1.52	1.38	5	8	0	1	100%	1
4YUU_CLA_A1_406	87%	26%	0.067	0.939	1.56	1.43	5	9	0	1	100%	1
4YUU_CLA_D1_402	87%	29%	0.063	0.934	1.47	1.37	5	8	0	1	100%	1
4YUU_CLA_B1_608	85%	29%	0.074	0.94	1.49	1.35	5	7	0	1	100%	1
4YUU_CLA_b1_614	85%	28%	0.077	0.943	1.47	1.42	6	8	0	1	100%	1
4YUU_CLA_b1_605	85%	27%	0.068	0.933	1.52	1.41	6	6	0	1	100%	1
4YUU_CLA_a2_404	84%	29%	0.071	0.933	1.54	1.31	8	8	0	1	100%	1
4YUU_CLA_b1_610	82%	28%	0.067	0.922	1.5	1.38	5	8	0	1	100%	1
4YUU_CLA_b2_615	82%	27%	0.069	0.936	1.56	1.41	5	8	0	1	92%	0.9231
4YUU_CLA_B2_608	82%	28%	0.072	0.925	1.49	1.38	5	9	0	1	100%	1
4YUU_CLA_B1_614	81%	29%	0.073	0.925	1.48	1.37	6	8	0	1	100%	1
4YUU_CLA_b1_613	81%	27%	0.075	0.926	1.52	1.4	8	7	0	1	100%	1
4YUU_CLA_B2_613	80%	26%	0.073	0.922	1.52	1.46	6	8	0	1	100%	1
4YUU_CLA_b1_607	80%	27%	0.076	0.923	1.57	1.36	5	8	0	1	100%	1
4YUU_CLA_B1_613	79%	27%	0.077	0.923	1.54	1.38	7	7	0	1	100%	1
4YUU_CLA_c1_511	79%	28%	0.081	0.927	1.47	1.4	6	8	0	1	100%	1
4YUU_CLA_b1_612	79%	28%	0.073	0.916	1.51	1.39	5	8	0	1	100%	1
4YUU_CLA_d1_404	78%	27%	0.075	0.916	1.57	1.4	5	8	0	1	100%	1
4YUU_CLA_b2_608	77%	29%	0.084	0.924	1.54	1.32	5	8	0	1	100%	1
4YUU_CLA_D2_406	77%	28%	0.074	0.913	1.52	1.38	5	8	0	1	100%	1
4YUU_CLA_B2_615	76%	29%	0.071	0.906	1.49	1.36	5	7	0	1	100%	1
4YUU_CLA_d2_405	76%	30%	0.077	0.912	1.49	1.32	5	8	0	1	100%	1
4YUU_CLA_b1_617	76%	28%	0.071	0.905	1.52	1.36	6	7	0	1	100%	1
4YUU_CLA_D2_401	75%	28%	0.079	0.911	1.48	1.39	6	8	0	1	100%	1
4YUU_CLA_C1_504	74%	29%	0.075	0.905	1.53	1.31	5	8	0	1	100%	1
4YUU_CLA_b2_614	74%	29%	0.08	0.91	1.48	1.37	6	7	0	1	100%	1
4YUU_CLA_B1_615	74%	29%	0.081	0.911	1.49	1.35	5	7	0	1	100%	1
4YUU_CLA_d1_401	74%	28%	0.076	0.905	1.51	1.38	5	9	0	1	100%	1
4YUU_CLA_b1_606	74%	29%	0.086	0.914	1.49	1.37	6	8	0	1	100%	1
4YUU_CLA_a2_413	74%	22%	0.062	0.931	1.72	1.5	6	10	0	1	77%	0.7692
4YUU_CLA_b1_620	73%	28%	0.08	0.906	1.53	1.38	5	8	0	1	100%	1
4YUU_CLA_b1_615	73%	26%	0.076	0.917	1.54	1.44	6	8	0	1	91%	0.9077
4YUU_CLA_b1_611	73%	30%	0.076	0.9	1.5	1.29	5	7	0	1	100%	1
4YUU_CLA_B2_607	72%	28%	0.076	0.899	1.53	1.36	6	9	0	1	100%	1
4YUU_CLA_a1_405	72%	21%	0.066	0.93	1.7	1.61	5	9	0	1	77%	0.7692
4YUU_CLA_C1_503	72%	27%	0.074	0.91	1.55	1.38	5	6	0	1	92%	0.9231
4YUU_CLA_B1_616	72%	28%	0.079	0.901	1.56	1.32	6	8	0	1	100%	1
4YUU_CLA_b2_612	72%	27%	0.078	0.899	1.55	1.39	8	7	0	1	100%	1
4YUU_CLA_C1_510	71%	29%	0.09	0.911	1.52	1.31	6	7	0	1	100%	1
4YUU_CLA_c1_504	71%	29%	0.091	0.912	1.48	1.36	5	7	0	1	100%	1
4YUU_CLA_b2_620	71%	27%	0.093	0.911	1.52	1.41	5	8	0	1	100%	1
4YUU_CLA_B1_619	70%	28%	0.08	0.897	1.51	1.39	5	8	0	1	100%	1
4YUU_CLA_B2_609	70%	27%	0.082	0.899	1.49	1.43	6	9	0	1	100%	1
4YUU_CLA_A2_402	70%	28%	0.085	0.901	1.59	1.31	7	8	0	1	100%	1
4YUU_CLA_d1_406	70%	28%	0.079	0.894	1.51	1.4	5	8	0	1	100%	1
4YUU_CLA_B2_617	69%	28%	0.076	0.889	1.5	1.38	5	7	0	1	100%	1
4YUU_CLA_B1_612	69%	27%	0.095	0.908	1.54	1.38	5	8	0	1	100%	1
4YUU_CLA_b2_617	69%	29%	0.081	0.893	1.51	1.34	5	8	0	1	100%	1
4YUU_CLA_B2_614	68%	29%	0.082	0.891	1.47	1.37	6	8	0	1	100%	1
4YUU_CLA_c2_505	68%	28%	0.084	0.893	1.48	1.4	5	8	0	1	100%	1
4YUU_CLA_B2_605	67%	28%	0.075	0.881	1.51	1.38	5	7	0	1	100%	1
4YUU_CLA_C1_508	67%	29%	0.087	0.893	1.51	1.35	5	6	0	1	100%	1
4YUU_CLA_A1_404	67%	22%	0.071	0.915	1.71	1.53	6	8	0	1	78%	0.7846
4YUU_CLA_b2_611	66%	28%	0.097	0.901	1.5	1.39	5	8	0	1	100%	1
4YUU_CLA_B2_619	65%	28%	0.075	0.875	1.5	1.37	5	8	0	1	100%	1
4YUU_CLA_B1_610	65%	29%	0.087	0.887	1.51	1.34	5	8	0	1	100%	1
4YUU_CLA_B1_617	64%	29%	0.079	0.877	1.48	1.36	5	8	0	1	100%	1
4YUU_CLA_C1_505	64%	28%	0.082	0.88	1.48	1.43	5	7	0	1	100%	1
4YUU_CLA_c1_506	63%	27%	0.084	0.878	1.51	1.43	5	8	0	1	100%	1
4YUU_CLA_B1_605	63%	29%	0.088	0.882	1.52	1.34	5	8	0	1	100%	1
4YUU_CLA_A1_405	63%	24%	0.084	0.905	1.7	1.44	6	9	0	1	85%	0.8462
4YUU_CLA_c1_507	63%	28%	0.086	0.879	1.51	1.37	6	7	0	1	100%	1
4YUU_CLA_c2_503	62%	28%	0.103	0.895	1.52	1.35	5	6	0	1	100%	1
4YUU_CLA_B2_618	62%	25%	0.083	0.886	1.61	1.43	6	7	0	1	92%	0.9231
4YUU_CLA_b2_624	61%	29%	0.084	0.871	1.48	1.38	5	8	0	1	100%	1
4YUU_CLA_b1_616	61%	29%	0.089	0.875	1.5	1.36	6	8	0	1	100%	1
4YUU_CLA_C1_507	61%	29%	0.094	0.88	1.54	1.33	6	9	0	1	100%	1
4YUU_CLA_B1_607	60%	28%	0.09	0.888	1.58	1.34	5	7	0	1	92%	0.9231
4YUU_CLA_b2_616	60%	26%	0.089	0.885	1.59	1.41	5	8	0	1	92%	0.9231
4YUU_CLA_B2_616	59%	23%	0.081	0.893	1.67	1.49	6	8	0	1	83%	0.8308
4YUU_CLA_c1_512	59%	28%	0.103	0.884	1.5	1.39	6	7	0	1	100%	1
4YUU_CLA_B2_612	58%	28%	0.097	0.875	1.51	1.38	5	9	0	1	100%	1
4YUU_CLA_c2_511	58%	29%	0.099	0.876	1.5	1.35	5	7	0	1	100%	1
4YUU_CLA_a1_404	57%	27%	0.096	0.885	1.62	1.34	6	9	0	1	92%	0.9231
4YUU_CLA_a2_405	57%	29%	0.093	0.865	1.47	1.38	5	9	0	1	100%	1
4YUU_CLA_b2_613	56%	28%	0.096	0.867	1.52	1.36	5	7	0	1	100%	1
4YUU_CLA_C1_511	56%	28%	0.098	0.868	1.51	1.37	6	7	0	1	100%	1
4YUU_CLA_b1_619	56%	28%	0.098	0.868	1.53	1.36	6	7	0	1	100%	1
4YUU_CLA_c1_510	56%	27%	0.079	0.847	1.5	1.44	6	8	0	1	100%	1
4YUU_CLA_c1_505	55%	29%	0.093	0.861	1.51	1.34	5	7	0	1	100%	1
4YUU_CLA_C1_509	55%	26%	0.085	0.851	1.5	1.48	5	8	0	1	100%	1
4YUU_CLA_c2_510	55%	25%	0.101	0.898	1.68	1.41	6	7	0	1	83%	0.8308
4YUU_CLA_C1_506	55%	29%	0.089	0.854	1.5	1.36	6	8	0	1	100%	1
4YUU_CLA_b1_609	55%	28%	0.101	0.866	1.52	1.35	5	8	0	1	100%	1
4YUU_CLA_B2_610	54%	29%	0.088	0.852	1.5	1.36	5	7	0	1	100%	1
4YUU_CLA_c1_509	54%	28%	0.095	0.857	1.51	1.36	5	7	0	1	100%	1
4YUU_CLA_B1_606	54%	29%	0.098	0.86	1.49	1.37	5	8	0	1	100%	1
4YUU_CLA_c2_504	54%	29%	0.101	0.863	1.51	1.35	5	8	0	1	100%	1
4YUU_CLA_c1_513	54%	26%	0.075	0.85	1.57	1.43	6	8	0	1	92%	0.9231
4YUU_CLA_b2_606	52%	28%	0.111	0.868	1.49	1.38	6	7	0	1	100%	1
4YUU_CLA_b2_610	51%	29%	0.091	0.844	1.5	1.36	5	8	0	1	100%	1
4YUU_CLA_B1_609	51%	24%	0.1	0.852	1.5	1.61	5	11	0	1	100%	1
4YUU_CLA_c2_502	50%	29%	0.092	0.842	1.5	1.36	5	8	0	1	100%	1
4YUU_CLA_c2_508	50%	29%	0.102	0.85	1.52	1.33	5	7	0	1	100%	1
4YUU_CLA_B1_618	50%	26%	0.103	0.87	1.6	1.41	7	6	0	1	89%	0.8923
4YUU_CLA_c2_512	49%	29%	0.093	0.838	1.51	1.33	5	8	0	1	100%	1
4YUU_CLA_b1_604	49%	29%	0.097	0.84	1.54	1.29	5	7	0	1	100%	1
4YUU_CLA_c2_506	49%	25%	0.096	0.85	1.57	1.49	6	9	0	1	94%	0.9385
4YUU_CLA_c2_507	48%	24%	0.095	0.868	1.66	1.48	5	7	0	1	83%	0.8308
4YUU_CLA_B2_606	48%	28%	0.094	0.835	1.52	1.35	5	7	0	1	100%	1
4YUU_CLA_b2_609	47%	27%	0.104	0.852	1.54	1.43	6	7	0	1	94%	0.9385
4YUU_CLA_B2_611	47%	28%	0.097	0.833	1.51	1.36	5	8	0	1	100%	1
4YUU_CLA_c2_509	46%	26%	0.084	0.817	1.49	1.48	5	9	0	1	100%	1
4YUU_CLA_C1_502	46%	28%	0.093	0.826	1.47	1.4	5	8	0	1	100%	1
4YUU_CLA_b2_619	46%	26%	0.105	0.855	1.6	1.4	6	6	0	1	91%	0.9077
4YUU_CLA_A2_404	46%	22%	0.08	0.851	1.77	1.47	6	9	0	1	78%	0.7846
4YUU_CLA_c1_503	46%	28%	0.102	0.834	1.46	1.41	5	8	0	1	100%	1
4YUU_CLA_b2_618	45%	28%	0.104	0.834	1.51	1.36	5	8	0	1	100%	1
4YUU_CLA_D1_403	45%	23%	0.087	0.854	1.69	1.48	5	6	0	1	78%	0.7846
4YUU_CLA_A2_403	41%	27%	0.113	0.836	1.58	1.35	5	8	0	1	94%	0.9385
4YUU_CLA_C2_506	40%	28%	0.104	0.811	1.49	1.38	5	7	0	1	100%	1
4YUU_CLA_c1_508	38%	21%	0.104	0.846	1.76	1.53	5	10	0	1	77%	0.7692
4YUU_CLA_C1_513	36%	27%	0.095	0.795	1.57	1.39	6	7	0	1	94%	0.9385
4YUU_CLA_d2_404	34%	22%	0.097	0.819	1.73	1.53	5	8	0	1	77%	0.7692
4YUU_CLA_C1_512	33%	28%	0.096	0.772	1.48	1.39	6	8	0	1	100%	1
4YUU_CLA_B1_611	32%	27%	0.105	0.783	1.58	1.36	5	8	0	0	95%	0.9538
4YUU_CLA_C1_514	31%	20%	0.102	0.824	1.8	1.57	5	7	0	1	69%	0.6923
4YUU_CLA_B2_604	30%	19%	0.094	0.821	1.88	1.61	5	8	0	1	63%	0.6308
4YUU_CLA_c1_515	30%	24%	0.096	0.783	1.63	1.48	5	8	0	1	85%	0.8462
4YUU_CLA_c1_516	29%	29%	0.111	0.767	1.48	1.37	5	8	0	1	100%	1
4YUU_CLA_C2_513	29%	24%	0.113	0.802	1.71	1.44	5	7	0	1	82%	0.8154
4YUU_CLA_C2_516	28%	21%	0.104	0.806	1.75	1.55	5	7	0	1	71%	0.7077
4YUU_CLA_C2_508	27%	21%	0.131	0.815	1.71	1.57	5	9	0	1	77%	0.7692
4YUU_CLA_C2_509	26%	28%	0.118	0.759	1.51	1.36	5	7	0	1	100%	1
4YUU_CLA_c2_515	25%	21%	0.11	0.798	1.75	1.56	5	7	0	1	71%	0.7077
4YUU_CLA_C2_504	25%	22%	0.107	0.792	1.76	1.52	5	6	0	1	71%	0.7077
4YUU_CLA_C2_507	24%	20%	0.112	0.792	1.81	1.6	6	6	0	1	69%	0.6923
4YUU_CLA_C2_505	23%	28%	0.124	0.747	1.51	1.36	5	7	0	1	100%	1
4YUU_CLA_C2_511	23%	21%	0.11	0.771	1.7	1.62	6	9	0	1	77%	0.7692
4YUU_CLA_c2_513	20%	24%	0.102	0.734	1.64	1.5	6	8	0	1	83%	0.8308
4YUU_CLA_B1_604	20%	19%	0.106	0.77	1.87	1.56	5	6	0	1	65%	0.6462
4YUU_CLA_C2_503	19%	28%	0.12	0.71	1.49	1.42	5	7	0	1	100%	1
4YUU_CLA_D2_404	19%	27%	0.113	0.713	1.56	1.4	5	9	0	1	94%	0.9385
4YUU_CLA_K2_101	17%	25%	0.105	0.706	1.64	1.44	6	7	0	1	85%	0.8462
4YUU_CLA_C2_510	8%	20%	0.136	0.659	1.78	1.6	5	7	0	1	69%	0.6923
4YUU_CLA_C2_518	6%	18%	0.124	0.628	1.86	1.69	5	8	0	1	63%	0.6308
4YUU_CLA_b2_604	6%	20%	0.129	0.628	1.85	1.56	5	6	0	1	65%	0.6462
5GTI_CLA_a_405	100%	7%	0.036	0.982	2.11	2.77	15	30	0	1	100%	1
5V2C_CLA_B_604	99%	14%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
2D2C_CLA_O_1201	99%	10%	0.057	0.991	2.34	1.98	19	15	7	4	100%	1
5B5E_CLA_A_405	99%	11%	0.046	0.976	1.9	2.26	16	28	0	0	100%	1
5WS6_CLA_a_350	99%	7%	0.048	0.975	2.02	2.86	16	26	0	1	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

4YUU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4YUU designated by the RCSB