DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4YUU designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4YUU_DGD_h1_101 | 77% | 52% | 0.067 | 0.917 | 0.88 | 0.96 | 2 | 4 | 0 | 0 | 94% | 1 |
4YUU_DGD_h2_102 | 73% | 54% | 0.077 | 0.914 | 0.87 | 0.91 | 2 | 2 | 0 | 0 | 94% | 1 |
4YUU_DGD_C1_516 | 72% | 52% | 0.07 | 0.902 | 0.85 | 1 | 2 | 4 | 0 | 0 | 94% | 1 |
4YUU_DGD_c2_514 | 70% | 52% | 0.069 | 0.896 | 0.87 | 0.97 | 2 | 4 | 0 | 0 | 94% | 1 |
4YUU_DGD_c1_518 | 68% | 52% | 0.072 | 0.892 | 0.87 | 1 | 2 | 5 | 0 | 0 | 94% | 1 |
4YUU_DGD_H1_101 | 68% | 53% | 0.083 | 0.903 | 0.88 | 0.92 | 2 | 3 | 0 | 0 | 94% | 1 |
4YUU_DGD_c2_517 | 59% | 55% | 0.076 | 0.865 | 0.89 | 0.84 | 2 | 2 | 0 | 0 | 94% | 1 |
4YUU_DGD_C1_517 | 58% | 56% | 0.08 | 0.861 | 0.86 | 0.85 | 2 | 3 | 0 | 0 | 97% | 1 |
4YUU_DGD_C1_515 | 52% | 49% | 0.09 | 0.883 | 0.96 | 1.01 | 2 | 4 | 0 | 0 | 79% | 1 |
4YUU_DGD_c1_520 | 51% | 55% | 0.085 | 0.849 | 0.87 | 0.86 | 2 | 2 | 0 | 0 | 94% | 1 |
4YUU_DGD_c1_514 | 48% | 48% | 0.086 | 0.868 | 0.96 | 1.04 | 2 | 4 | 0 | 0 | 77% | 1 |
4YUU_DGD_c2_516 | 43% | 48% | 0.102 | 0.86 | 0.96 | 1.03 | 2 | 3 | 0 | 0 | 79% | 1 |
4YUU_DGD_H2_101 | 41% | 54% | 0.088 | 0.813 | 0.88 | 0.91 | 2 | 3 | 0 | 0 | 94% | 1 |
4YUU_DGD_C2_512 | 24% | 43% | 0.096 | 0.815 | 1.16 | 1.06 | 2 | 2 | 0 | 0 | 50% | 1 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 1 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 1 |
3WU2_DGD_C_518 | 92% | 45% | 0.063 | 0.965 | 0.79 | 1.31 | 3 | 9 | 0 | 0 | 94% | 1 |
7M78_DGD_L_207 | 91% | 40% | 0.082 | 0.97 | 0.93 | 1.4 | 2 | 14 | 4 | 0 | 100% | 1 |